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DendroTweaks 0.5.2 documentation
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Getting started:

  • Introduction
  • Installation
  • Changelog
  • Support

Tutorials:

  • Using the GUI
  • Quick start
  • Basics
    • Importing and Exporting Models
    • Neuronal Morphologies
    • Distributing Parameters
    • Segmentation
    • Adding Synapses
    • Analyzing Neural Models
    • Units
  • Advanced usage
    • Working with SWC files
    • Morphology: Trees (Notebook)
    • Morphology: Paths and Subtrees (Notebook)
    • Choosing a Simulator
    • Simplifying Neuronal Morphology
    • Morphology reduction (Notebook)
    • Synaptic clustering (Notebook)
    • Incorporating exported models into networks (Notebook)
    • Working with MOD files
    • Standardizing channel models
    • Channel models (Notebook)
    • NMODL to Python conversion for Jaxley (Notebook)
    • Data Format Specification

API Reference:

  • Index
  • Morphology
    • Input/Output
      • Morphology Factories
      • SWC Reader
    • Tree graph
    • Point tree
    • Section tree
    • Segment tree
    • Domain
  • Membrane
    • Input/Output
      • Mechanism Factories
      • MOD File Loader
      • MOD File Converter
      • MOD Reader
      • MOD Parser
      • Code generators
    • Mechanisms
    • Groups
    • Distributions
  • Stimuli
    • IClamps
    • Synapses
  • Core
    • Model
    • Path manager
    • Simulators
  • Analysis
    • Morphometric analysis
    • Electrophysiology

Useful resources:

  • Glossary
  • Important literature
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MorphologyΒΆ

  • Input/Output
    • Morphology Factories
    • SWC Reader
  • Tree graph
    • Node
    • Tree
  • Point tree
    • Point
    • PointTree
  • Section tree
    • Section
    • SectionTree
  • Segment tree
    • Segment
    • SegmentTree
  • Domain
    • Domain
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