Morphometric analysis¶

dendrotweaks.analysis.morphometric_analysis.get_node_data(nodes)[source]¶

dendrotweaks.analysis.morphometric_analysis.calculate_section_statistics(sections, param_name=None)[source]¶

dendrotweaks.analysis.morphometric_analysis.calculate_cell_statistics(model)[source]¶

dendrotweaks.analysis.morphometric_analysis.calculate_domain_statistics(model, domain_names=None, param_name=None)[source]¶

dendrotweaks.analysis.morphometric_analysis.calculate_segment_statistics(model, segments)[source]¶

dendrotweaks.analysis.morphometric_analysis.update_histogram(model, param_name, segments, **kwargs)[source]¶

dendrotweaks.analysis.morphometric_analysis.calculate_pairwise_synaptic_distances(synapses)[source]¶

Calculates the pairwise distances between synapses based on their locations on the morphology. :param synapses: A list of Synapse objects. :type synapses: list[Synapse]

Returns:: A 2D array of shape (N, N) where N is the number of synapses, containing the pairwise distances.
Return type:: np.ndarray